MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Chlamydia trachomatis L3/404/LN plasmid pL3404

Total Repeats: 28

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_020957	TGG	2	6	12	17	0 %	33.33 %	66.67 %	0 %	Non-Coding
2	NC_020957	TGG	2	6	34	39	0 %	33.33 %	66.67 %	0 %	Non-Coding
3	NC_020957	TGG	2	6	56	61	0 %	33.33 %	66.67 %	0 %	Non-Coding
4	NC_020957	TGG	2	6	78	83	0 %	33.33 %	66.67 %	0 %	Non-Coding
5	NC_020957	TTG	2	6	106	111	0 %	66.67 %	33.33 %	0 %	Non-Coding
6	NC_020957	GTT	2	6	194	199	0 %	66.67 %	33.33 %	0 %	Non-Coding
7	NC_020957	AT	3	6	391	396	50 %	50 %	0 %	0 %	Non-Coding
8	NC_020957	T	6	6	437	442	0 %	100 %	0 %	0 %	Non-Coding
9	NC_020957	T	8	8	495	502	0 %	100 %	0 %	0 %	Non-Coding
10	NC_020957	ATTG	2	8	547	554	25 %	50 %	25 %	0 %	Non-Coding
11	NC_020957	T	7	7	608	614	0 %	100 %	0 %	0 %	Non-Coding
12	NC_020957	A	7	7	641	647	100 %	0 %	0 %	0 %	Non-Coding
13	NC_020957	GGA	2	6	697	702	33.33 %	0 %	66.67 %	0 %	Non-Coding
14	NC_020957	AAC	2	6	766	771	66.67 %	0 %	0 %	33.33 %	Non-Coding
15	NC_020957	GT	4	8	933	940	0 %	50 %	50 %	0 %	Non-Coding
16	NC_020957	A	6	6	1032	1037	100 %	0 %	0 %	0 %	Non-Coding
17	NC_020957	AAT	2	6	2088	2093	66.67 %	33.33 %	0 %	0 %	Non-Coding
18	NC_020957	GTT	2	6	2097	2102	0 %	66.67 %	33.33 %	0 %	Non-Coding
19	NC_020957	T	7	7	2124	2130	0 %	100 %	0 %	0 %	Non-Coding
20	NC_020957	ATTT	2	8	4578	4585	25 %	75 %	0 %	0 %	Non-Coding
21	NC_020957	A	6	6	4598	4603	100 %	0 %	0 %	0 %	Non-Coding
22	NC_020957	A	6	6	5451	5456	100 %	0 %	0 %	0 %	Non-Coding
23	NC_020957	TCC	2	6	7349	7354	0 %	33.33 %	0 %	66.67 %	Non-Coding
24	NC_020957	AT	5	10	7363	7372	50 %	50 %	0 %	0 %	Non-Coding
25	NC_020957	TAT	2	6	7374	7379	33.33 %	66.67 %	0 %	0 %	Non-Coding
26	NC_020957	AT	6	12	7378	7389	50 %	50 %	0 %	0 %	Non-Coding
27	NC_020957	GATTT	2	10	7395	7404	20 %	60 %	20 %	0 %	Non-Coding
28	NC_020957	GA	4	8	7408	7415	50 %	0 %	50 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.